Browsing by Author "Kochzius, Marc"

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DNA barcoding reveals endangered and protected elasmobranchs in Tanzanian fish markets
(Western Indian Ocean Journal of Marine Science, 2023) Rumisha, Cyrus; Simwanza, Rehema J.; Nehemia, Alex; Mdegela, Robinson H.; Kochzius, Marc
Western Indian Ocean countries have banned elasmobranch finning and enacted legislation to of Marine Science 22(1): 57-65protect endangered elasmobranchs, however finned and morphologically deformed specimens [doi: 10.4314/wiojms.v22i1.6]are still landed and traded on Tanzanian fish markets. Such specimens are difficult to identify Received:morphologically, and it is possible that protected elasmobranchs are among these. This study September 19, 2022used DNA barcoding to uncover protected elasmobranchs in 102 specimens traded on Tan- Accepted:zanian fish markets. The sampled specimens revealed 23 elasmobranch species, 12 of which April 04, 2023(52.1 %) were classified as endangered (EN) or critically endangered (CR) on the IUCN Red List. Published:Three of the identified species (great hammerhead Sphyrna mokarran, oceanic whitetip shark June 16, 2023Carcharhinus longimanus, and pelagic thresher Alopias pelagicus) are protected by Tanzanian laws. Copyright:Hence, it is advised that steps be taken to strengthen law enforcement at landing sites and fish Owned by the journal.markets in the country. Furthermore, the Third Schedule of Fisheries (Amendment) Regula- The articles are open accesstions of 2009 should be updated to include 11 EN and CR elasmobranchs that are not on the list. articles distributed underAdditionally, national and regional elasmobranch conservation plans should be developed to the terms and conditions of the Creative Commons Attribution (CC BY 4.0) licence. prevent the exploitation of endangered elasmobranchs.
DNA barcoding validates new sightings of tridacna elongatissima in Tanzania and Mozambique (Western Indian Ocean)
(Springer, 2022) Velkeneers, Xander; Dissanayake, P. A. K. N.; Huyghe, Filip; Nehemia, Alex; Ratsimbazafy, Hajaniaina Andrianavalonarivo; Kochzius, Marc
There are currently 12 recognised extant species of giant clams (Cardiidae: Tridacninae) inhabiting the tropical waters of the Indo-Pacific. Six species have been newly described or rediscovered since 1982, such as the recently resurrected species Tridacna elongatissima in the Western Indian Ocean. In order to investigate the distri- bution range of this species, 24 specimens have been col- lected and identified by DNA barcoding. This study provides the first record for T. elongatissima in Tanzania and expands both the northern (Zanzibar, Tanzania) and southern (Ponta de Ouro, Mozambique) ranges of this species.
Ecological impact of salt farming in mangroves on the habitat and food sources of austruca occidentalis and littoraria subvittata
(Elservier, 2019) Nehemia, Alex; Chen, Margaret; Kochzius, Marc; Dehairs, Frank; Brion, Natacha
The impact of salt farming on the habitats and food sources of Austruca occidentalis and Littoraria subvittata was studied in mangroves along the coast of Tanzania using stable isotopes ( 13 C and 15 N) and sediment particle size analysis. The 13 C and 15 N stable isotope composition in mangrove leaves, sediments and invertebrate tissues, were used to evaluate whether there are differences in feeding ecology of the crab Austruca occidentalis and the snail Littoraria subvittata collected from natural mangroves and mangroves around the salt ponds. Organic C, total N content and particle size distribution in sediments were used to assess if there are differences in habitat characteristics of mangroves around the salt ponds. Mangrove leaves and sediments were found to be 13 C en- riched around salt ponds compared to those from natural mangroves. Likewise the macroinvertebrates collected from mangroves around salt ponds were found be enriched in 13 C relative to undisturbed mangroves. In addition, mangrove sediments around salt ponds were poorer in organic carbon and nitrogen and had more sand content compared to sediments from natural mangroves. These results indicate that salt pond activities have contributed to the modification of the habitats of macroinvertebrates by causing δ 13 C stable isotopes enrichment and al- teration of sediment characteristics in the ecosystem.
Genetic erosion in the snail littoraria subvittata (reid, 1986) due to mangrove deforestation
(Journal of molluscan studies, 2016) Nehemia, Alex; Huyghe, Filip; Kochzius, Marc
In tropical coastal ecosystems mangrove forests are important as feeding, spawning, breeding and nursery grounds for many marine species. High human population pressure in coastal areas has led to the loss and deterioration of mangrove habitats. Solar salt production can affect these habitats along the East African coast. Littorinid snails live on mangrove trees, forming an important component of the mangrove ecosys- tem and have been used as bioindicators of environmental health and community stress. Littoraria subvittata is the most abundant littorinid species in mangroves along the East African coast. Partial mitochondrial cytochrome oxidase subunit 1 (COI) gene sequences of 298 individuals were used to assess the impact of mangrove deforestation at salt ponds on the genetic diversity and structuring of L. subvittata populations, as well as to infer the demographic history of the species. Nucleotide and haplotype diversities were found to be lower in samples from mangroves at salt ponds than in samples from natural mangroves. The mean nucleotide diversity was 0.049 ± 0.036% and 0.115 ± 0.068% in mangroves at salt ponds and natural mangroves, respectively. The mean haplotype diversity was 0.23 ± 0.14 and 0.50 ± 0.14 in mangroves at salt ponds and natural mangroves, respectively. Analysis of molecular variance (AMOVA) detected a sig- nificant population structure (Ф st = 0.049; P < 0.0001) for the combined populations. Hierarchical AMOVA detected a significant population genetic structure only between populations from mangroves at salt ponds and natural mangroves (Φ ct = 0.022; P < 0.05), but not between any other groupings. Populations from natural mangrove sites showed a significant genetic structure (Ф st = 0.054, P < 0.0001), while populations from sites at salt ponds could not be differentiated (Ф st = −0.0026, P = 0.64). Reduced effective population size was observed in most samples from mangrove sites at salt ponds compared with natural mangrove. The direction of migrants was mostly from salt ponds to natural mangroves. These results show that salt ponds have a negative impact on the genetic diversity of L. subvittata populations and modify the population’s genetic structure.
Reduced genetic diversity and alteration of gene flow in a fiddler crab due to mangrove degradation
(PLOS, 2017) Nehemia, Alex; Kochzius, Marc
The fiddler crab Austruca occidentalis is a dominant species in mangrove forests along the East African coast. It enhances soil aeration and, through its engineering activities, makes oth- erwise-inaccessible food available for other marine organisms. Despite its importance, the hab- itat of A. occidentalis is threatened by human activities. Clearing the mangroves for salt farming and selective logging of mangroves trees continue to jeopardise mangrove ecosystems in the Western Indian Ocean. This study aims to use partial mitochondrial COI gene sequences and nuclear microsatellites to determine whether salt farming activities in mangroves have a nega- tive impact on the genetic diversity and gene flow of A. occidentalis collected along the Tanza- nia coast. The level of genetic diversity for both mitochondrial DNA and nuclear microsatellites are relatively lower in samples from salt ponds compared to natural mangrove sites. Analysis of molecular variance (AMOVA) among all populations showed low but significant differentia- tion (COI: F st = 0.022, P < 0.05; microsatellites: F st = 0.022, P < 0.001). A hierarchical AMOVA indicates lower but significant genetic differentiation among populations from salt ponds and natural mangroves sites (COI: F ct = 0.033, P < 0.05; microsatellites: F ct = 0.018, P = < 0.01). These results indicate that salt farming has a significant negative impact on the genetic diver- sity of A. occidentalis. Since higher genetic diversity contributes to a stable population, restoring the cleared habitats might be the most effective measures for the conservation of genetic diver- sity and hence adaptive potential to environmental change in this species.